Multi-view Classifier and Fast Brain Tumor Segmentation Using Geometric Fast Data Density Functional Transform

Hsuan Ya Liang, Yu Hsuan Chiang, Ya Chun Lin, Kuan Yu Chen, E. Ping Tsai, Yu Ting Tseng, Chien Chang Chen

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

The article proposed a new architecture for fast brain tumor image segmentation based on their intrinsic geometric properties using the geometric fast data density functional transform (g-fDDFT). The g-fDDFT, as a feature pre-extractor, utilized the structure of AutoEncoder to provide global convolutions on images for extracting global features. It also exploited the geometric properties of energy landscapes offered by functional operations to reduce the computational costs caused by convolutional operations efficiently. Under the g-fDDFT framework, the computational complexity would reduce from to. To verify its performance on tasks of brain tumor image segmentation and the recognition of oriented views of MRI data, we employed open-access resources from BraTS 2020 and clinical image datasets. We also used the U-Net, 3D-Unet, D-UNet, and nnU-Net as our backbone models for tumor segmentation. Experimental results validated that the training and inference time using the proposed g-fDDFT significantly reduced by 57% and 52%, respectively, compared to that using the naïve D-UNet. Meanwhile, the accuracy estimations of brain tumor image segmentation had comparable results between the backbone models and utilizing the g-fDDFT. The geometric multi-view classifier also benefited the recognition and segmentation of tumor and necrotic/peritumoral edema images of the clinical dataset. The capability of selecting tumor candidates and fast labeling also exhibits the exclusive performance of g-fDDFT. Its flexibility and corresponding physical constraints also reveal the possibility of model extension.

Original languageEnglish
Title of host publication16th IEEE International Conference on Nano/Molecular Medicine and Engineering, NANOMED 2023
PublisherIEEE Computer Society
Pages173-178
Number of pages6
ISBN (Electronic)9798350343700
DOIs
StatePublished - 2023
Event16th IEEE International Conference on Nano/Molecular Medicine and Engineering, NANOMED 2023 - Okinawa, Japan
Duration: 5 Dec 20238 Dec 2023

Publication series

NameIEEE International Conference on Nano/Molecular Medicine and Engineering, NANOMED
ISSN (Print)2159-6964
ISSN (Electronic)2159-6972

Conference

Conference16th IEEE International Conference on Nano/Molecular Medicine and Engineering, NANOMED 2023
Country/TerritoryJapan
CityOkinawa
Period5/12/238/12/23

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